Phylogenetic Tree prediction

Phylogenetic tree prediction

The source sequence multiple alignment could be formed from low and upper case letters. Upper case letters will show that there is a homology between correspondent fragments in alignment.

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References

Simple Query Form

Use homological fragments only Yes No	Scale	Algorithm	Matrix
Start position	End position	Gap penalty (in SD units)	Your E-mail address

Alignment

Alignment example:

ANMF     CGCGGGGTAGAGCAGCCTGGTAGCTCGTCGGGCTCATAA
AQTRNF   GCC-AGGATAGCTCAGTTGGTAGAGCAGAGGACTGAAAA
BGTRF    GCC-AGGATAGCTCAGTTGGTAGAGCAGAGGACTGAATA

ANMF     TCCTCTCCCCGCC----
AQTRNF   TCCGCCTCCCGGCACCA
BGTRF    TCCGCCTCCCGGCACCA

Last updated - August 14, 2000.
Any comments or suggestions are welcomed at: nik@genebee.msu.su